CDS

Accession Number TCMCG015C43915
gbkey CDS
Protein Id XP_027074912.1
Location join(22560270..22560940,22562156..22562330)
Gene LOC113699057
GeneID 113699057
Organism Coffea arabica

Protein

Length 281aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027219111.1
Definition succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category C
Description Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
M00148        [VIEW IN KEGG]
KEGG_Reaction R02164        [VIEW IN KEGG]
KEGG_rclass RC00045        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00235        [VIEW IN KEGG]
EC 1.3.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000104        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0005746        [VIEW IN EMBL-EBI]
GO:0005749        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006119        [VIEW IN EMBL-EBI]
GO:0006121        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009055        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009126        [VIEW IN EMBL-EBI]
GO:0009141        [VIEW IN EMBL-EBI]
GO:0009144        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009161        [VIEW IN EMBL-EBI]
GO:0009167        [VIEW IN EMBL-EBI]
GO:0009199        [VIEW IN EMBL-EBI]
GO:0009205        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042773        [VIEW IN EMBL-EBI]
GO:0042775        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044455        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045257        [VIEW IN EMBL-EBI]
GO:0045273        [VIEW IN EMBL-EBI]
GO:0045281        [VIEW IN EMBL-EBI]
GO:0045283        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046034        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070469        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0098800        [VIEW IN EMBL-EBI]
GO:0098803        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACTGGTTTGGTCCGACGAGCACTAGCTAGGGTTCAGTCATCAGCTTCGGCGGCGAAACTGGTGATAAGCCGGGCCCATGCATCGGAGTCCCAAGCCCAGCAAGTGGAACCCCAAGCGAAGAGCACTCACAGCCTGAAGACCTTCCAGATCTACCGATGGAACCCAGACGACCCCCAAAAGCCGGAGCTCAAAGATTACCACATCGACCTGAAGGAGTGTGGGCCCATGGTGTTGGACGCCTTGATTAAGATCAAGAATGAGATCGACCCATCCCTGACCTTCCGCAGGTCTTGCCGGGAAGGGATCTGTGGGTCCTGTGCCATGAACATCAATGGCTGCAATGGCTTGGCTTGCTTGACCAAGATTGATTCTGAGGGTTCGTCTGCCACCACCATCACACCGCTTCCCCATATGTTTGTGATTAAGGATTTGGTGGTGGACATGACCAACTTCTATAATCAGTATAAGTCCATTGAGCCGTGGCTGAAGAGGAAAACTTCCCTGGCCACCCCTGGGAAAGAGATACCGCAGTCCAAGAGCGATAGGGCTAAGCTGGATGGGATGTACGAATGCATTCTGTGTGCCTGCTGTAGCACTTCCTGCCCCAGTTACTGGTGGAACCCTGAGTCCTATCTTGGCCCTGCAGCCCTCCTCCATGCCAACCGTTGGATAATGGACAGTCGTGATGAATACACCAAGGAACGCCTGGATGCAGTGAACGATGAGTTCAAACTTTATCGATGCCATACAATTTTGAATTGTGCCAGGGCCTGCCCAAAGGGACTGAATCCTGGGAAGCAAATCCAAAACATCAAGAAACTTGAGCTTCTTGGTTCTTGA
Protein:  
MATGLVRRALARVQSSASAAKLVISRAHASESQAQQVEPQAKSTHSLKTFQIYRWNPDDPQKPELKDYHIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNINGCNGLACLTKIDSEGSSATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTSLATPGKEIPQSKSDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTKERLDAVNDEFKLYRCHTILNCARACPKGLNPGKQIQNIKKLELLGS